Protein Alignment scro and msx2a

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001025440.1
• Gene: msx2a / 573620
• ZFINID: ZDB-GENE-980526-322
• Length: 257
• Species: Danio rerio
• Alignment Length: 266
• Identity: 70/266 - (26%)
• Similarity: 102/266 - (38%)
• Gaps: 77/266 - (28%)

  Fly    71 TQNTVSTAAAAAVAHHHHNLSS-----IHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYR 130
            ||| |...:....|:|...:||     .|..:::.:|          |.||||..::|..|.|
Zfish     4 TQN-VGIFSGMISANHKSKVSSDEDDDDHGSRSVRTQ----------SLPFSVDALMSTKERS-- 55

  Fly   131 KLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTD 195
                         .::|..||:               |..:.:......|   :|::........
Zfish    56 -------------ESTSRGSIH---------------MTRIINQDDRSIY---SDSVDFTKRCES 89

  Fly   196 MRNSASWYGSTANDPRFAIS-RLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVL 259
            .:..:||    .|.||.:.| |..|.:......|..|                      ||.|..
Zfish    90 AKEDSSW----INKPRLSTSPRSQSPTICPLRKHKTN----------------------RKPRTP 128

  Fly   260 FTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHN 324
            ||.||:..|||:|:|::|||..||...:|.:.||.|||||||||.|.|.|| .:|..:......:
Zfish   129 FTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKR-LQEAELERFKMAS 192

  Fly   325 QPASSP 330
            :|...|
Zfish   193 KPILHP 198

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	31/55 (56%)
msx2a	NP_001025440.1	Homeodomain	123..179	CDD:459649	31/55 (56%)