DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and bsx

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_999892.1 Gene:bsx / 573364 ZFINID:ZDB-GENE-040628-4 Length:227 Species:Danio rerio


Alignment Length:263 Identity:72/263 - (27%)
Similarity:104/263 - (39%) Gaps:83/263 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 SNHSTPFSVTDIL----SPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGT 170
            :..||.|.:.|||    .|:.|.:         |||| |||.:|                 .|..
Zfish    14 TQRSTSFFIEDILLHKPKPLREVF---------PSPF-SNSIAS-----------------RMPL 51

  Fly   171 L-YHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSG 234
            | |..|.:     ||..|:...|:.        .....:.|.|..|.:...:   ...|...:.|
Zfish    52 LEYGYPLM-----PTPILAPHPHHP--------LHKPEHHPYFFTSGMQMPA---LFQHHPELPG 100

  Fly   235 LAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKI 299
             ..|             :|||.|.:|:.:|:..||:||:.|||||.|||..||:.:.|:.||||.
Zfish   101 -KHC-------------RRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKT 151

  Fly   300 WFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSA 364
            ||||.|.|.|:|.::    .|:....|....|.:               .::|:|:.|..|:.  
Zfish   152 WFQNRRMKHKKQLRK----TQDDQKTPNDVDRSL---------------ENTSESEMHEKNTD-- 195

  Fly   365 GNN 367
            |.|
Zfish   196 GKN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 30/55 (55%)
bsxNP_999892.1 Homeodomain 106..162 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..227 13/63 (21%)

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