DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and BARX1

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_067545.3 Gene:BARX1 / 56033 HGNCID:955 Length:254 Species:Homo sapiens


Alignment Length:142 Identity:41/142 - (28%)
Similarity:68/142 - (47%) Gaps:20/142 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 RFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQR----------------RKRRVL 259
            :|.::.|..|..|..:...|  .||...:.:...||:..|..:                |:.|.:
Human    86 KFPLAPLGCSGLSSALLAAG--PGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAKKGRRSRTV 148

  Fly   260 FTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHN 324
            ||:.|:..||:||::|:|||.|:|..||..:.|:..|||.|:||.|.|.|:...:....|  ...
Human   149 FTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLE--SPT 211

  Fly   325 QPASSPRRVAVP 336
            :|...|::.::|
Human   212 KPKGRPKKNSIP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 26/55 (47%)
BARX1NP_067545.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Homeodomain 143..199 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.

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