Protein Alignment scro and barhl1b

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001018142.1
• Gene: barhl1b / 553186
• ZFINID: ZDB-GENE-060118-2
• Length: 323
• Species: Danio rerio
• Alignment Length: 223
• Identity: 69/223 - (30%)
• Similarity: 96/223 - (43%)
• Gaps: 51/223 - (22%)

  Fly   118 VTDILSPIEESYRK-LELN-GNPPSPFR--------------------SNSSSSSINSPGTLTTS 160
            |.:..||:|.|.|. ||.. .:||||.|                    .:...|:.:.|.|:.:|
Zfish    32 VGECRSPLEFSPRSDLESGCSSPPSPRRECVEDAAQRQGHPLAYASHLQHGPISAGSQPRTVASS 96

  Fly   161 TM-------ANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLM 218
            .:       ..|.|....|.|.|     .||..   ||...         ...|:|   .|.::.
Zfish    97 FLIRDILADCKPLAACAPYSSNG-----QPTQE---AGRLA---------SKIADD---LIEKIH 141

  Fly   219 SSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPER 283
            |:|:|.: .:.....|....|.|...| |..|.:.||.|..||..|:.:|||.|::|:|||..:|
Zfish   142 SNSSSDS-EYKVKEEGDREISSSRDSP-QVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDR 204

  Fly   284 EHLASLIHLTPTQVKIWFQNHRYKCKRQ 311
            ..||:.::||.||||.|:||.|.|.|||
Zfish   205 MELAASLNLTDTQVKTWYQNRRTKWKRQ 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
barhl1b	NP_001018142.1	Homeodomain	175..231	CDD:459649	28/55 (51%)