Protein Alignment scro and barhl1a

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001017712.3
• Gene: barhl1a / 550407
• ZFINID: ZDB-GENE-050417-212
• Length: 299
• Species: Danio rerio
• Alignment Length: 351
• Identity: 86/351 - (24%)
• Similarity: 133/351 - (37%)
• Gaps: 102/351 - (29%)

  Fly   104 QSTLFNSNHSTPFSVTDILSPIEESYRKLELN---GNPPSPFRS---------------NSSSSS 150
            :|.|.:...|...|..:..||.|.|.|. :|:   .:||||.||               :|....
Zfish    12 ESILSHRASSPCMSKGECRSPAELSPRS-DLDSGCSSPPSPRRSSVEDAVHRRARALGLDSPLQI 75

  Fly   151 INSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAIS 215
            ...|.|:|:|.:..           .:...|.|   |:....|:..       |.:|.|....:.
Zfish    76 SQQPRTVTSSFLIR-----------DILADCKP---LAACAPYSST-------GQSAQDAEDCMD 119

  Fly   216 RLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSA 280
            :|.|:|:|.:...:.:.:.....|..||...:  |.:.||.|..||..|:.:|||.|::|:|||.
Zfish   120 KLHSNSSSDSEYRVKDEADREISSSRDSPNSR--LKKPRKARTAFTDHQLAQLERSFERQKYLSV 182

  Fly   281 PEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPC 345
            .:|..||:.::||.||||.|:||.|.|.|||.                   .|.:.:|.:
Zfish   183 QDRMELAASLNLTDTQVKTWYQNRRTKWKRQT-------------------AVGLELLAE----- 223

  Fly   346 SGNNSSSQSQ--------QHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSH 402
            :||.|:.|..        |                         |:.:|:..|..|.....|::.
Zfish   224 AGNYSALQRMFPSPYFYPQ-------------------------SLVSNLDPGPGLYLYRGPSAP 263

  Fly   403 SPDTSSSL---LASYGTVGGSNVAML 425
            .|.....|   :..:|..||.:.|.|
Zfish   264 PPPVQRPLVPRILLHGLQGGGDPASL 289

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
barhl1a	NP_001017712.3	None