Protein Alignment scro and hoxb3

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001015971.1
• Gene: hoxb3 / 548725
• XenbaseID: XB-GENE-482576
• Length: 386
• Species: Xenopus tropicalis
• Alignment Length: 402
• Identity: 97/402 - (24%)
• Similarity: 143/402 - (35%)
• Gaps: 117/402 - (29%)

  Fly    95 HLQNLHSQHQSTLFNSNHSTPFSVTDILSP-------IEESYRKLELNGNPPSPFRSNSSSSSIN 152
            |:.|...:...:|.:..||.|......|:.       ..|..:.|....||.|...|:||.:|::
 Frog    37 HMDNEFQRSSCSLQSLGHSGPLVKAKNLNGSCMRPNLSSEQSQPLSPTANPSSNTNSSSSQASLS 101

  Fly   153 SPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTAND---PRFAI 214
            .|                   ||.                    ::.||  ||.|:.   |....
 Frog   102 KP-------------------SPA--------------------KSQAS--GSPASKQIFPWMKE 125

  Fly   215 SRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKR-RVLFTQAQVYELERRFKQQRYL 278
            ||..|...|...:......|      .|..|   |.:...|| |..:|.||:.|||:.|...|||
 Frog   126 SRQNSKQKSSPPAPAAESCG------GDRSP---PGSSASKRARTAYTSAQLVELEKEFHFNRYL 181

  Fly   279 SAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGK 343
            ..|.|..:|:|::|:..|:||||||.|.|.|:..|.|.|:..:....|.|:|     |:.::...
 Frog   182 CRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKVKGMSSSSGGASPTSTP-----PLSMQSSA 241

  Fly   344 PCSGN----------------NSSSQ------------SQQHGTNSTSAGNNTGSANNGNANSGI 380
            ...|:                |.|.|            |||...|:.:..::.|...||.|
 Frog   242 GFLGSMHSMTANYEAPSPPPFNKSHQNAYYQNPGKGCPSQQKYGNTAAEYDHHGLQGNGGA---- 302

  Fly   381 VSVTANVSGGLNLITGDAPNSHSPDTSSSLLASYGTVGGSNVAMLQQPCNNTLMSNSLAMAYRNQ 445
             .|:.|:.|....:.|:..:| .|.....|   ||.   :::|  .||.|         |.|...
 Frog   303 -YVSPNMQGSPVYVGGNYVDS-VPAQGPPL---YGL---NHLA--HQPTN---------MDYNGA 348

  Fly   446 NNFISNGHQQQC 457
            ....::.|...|
 Frog   349 PPMPASQHHAPC 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	27/56 (48%)
hoxb3	NP_001015971.1	Homeodomain	157..213	CDD:459649	27/55 (49%)
		DUF4074	325..384	CDD:463833	11/53 (21%)