DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and NKX1-1

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001277008.1 Gene:NKX1-1 / 54729 HGNCID:24975 Length:448 Species:Homo sapiens


Alignment Length:415 Identity:95/415 - (22%)
Similarity:125/415 - (30%) Gaps:174/415 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 TPFSVTDILSPIEESYRKLE-------------------------LNGNPP-------------- 139
            |.|||.|||.|.:.:.|:..                         .:|.||              
Human    80 TSFSVLDILDPNKFNSRRRRCVLLGPVAPAACAPCASAPCAPAPAASGRPPRAEELERRALAGAG 144

  Fly   140 -------------SPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSP---------------- 175
                         .||::..:.         |..|  |.|:.|...|||                
Human   145 GVGAAGAEPPNAGDPFKAGEAE---------TNDT--NGYSSGGGGHSPSADSGDEVPDDEDDDE 198

  Fly   176 ----------GVQTYCGPTDNLSLAGH------YTDMRNSASWYGSTANDPRFAISRLMSSSASG 224
                      |.:...|....|...|.      .||....|:...:.|..|| ..|.:......|
Human   199 DEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPR-ENSPVAQGPPGG 262

  Fly   225 TMSHMG---NMSGLAACSV-------SDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLS 279
            ..:..|   ...|.|..:.       ||||.     .:.|:.|..||..|:..||.:||..||||
Human   263 AAAPGGAGTTPQGTATAAKPKRKRTGSDSKS-----GKPRRARTAFTYEQLVALENKFKATRYLS 322

  Fly   280 APEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKP 344
            ..||.:||..:.||.|||||||||.|.|.|:|                 :|              
Human   323 VCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-----------------NP-------------- 356

  Fly   345 CSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSPDTSSS 409
              |.::|:.:...|.....||..||                 :.|||      :|.|.||...:.
Human   357 --GADTSAPTGGGGGPGPGAGPGTG-----------------LPGGL------SPLSPSPPMGAP 396

  Fly   410 LLASYGTVG------GSNVAMLQQP 428
             |..:|..|      |..|...|.|
Human   397 -LGMHGPAGYPAHGPGGLVCAAQLP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 30/55 (55%)
NKX1-1NP_001277008.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..80 95/415 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..299 33/200 (17%)
Homeodomain 297..353 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..397 18/103 (17%)

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