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Protein Alignment scro and nkx2.2b
DIOPT Version :9
Sequence 1: | NP_001015473.1 |
Gene: | scro / 3355151 |
FlyBaseID: | FBgn0287186 |
Length: | 468 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007783.2 |
Gene: | nkx2.2b / 493627 |
ZFINID: | ZDB-GENE-050217-3 |
Length: | 237 |
Species: | Danio rerio |
Alignment Length: | 151 |
Identity: | 72/151 - (47%) |
Similarity: | 93/151 - (61%) |
Gaps: | 17/151 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 195 DMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVL 259
|....|.|.||:... ::.:. |:|.......:.....:...|..|| .::||||:|
Zfish 48 DSSRDALWLGSSCGH-KYPVP---SASPEELNPELSADESVDRESSEDS-------GKKRKRRIL 101
Fly 260 FTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHN 324
|::.|.:||||||:||||||||||||||.|:|||||||||||||||||.||...||.: :
Zfish 102 FSKTQTFELERRFRQQRYLSAPEREHLAKLLHLTPTQVKIWFQNHRYKVKRARAEKGL------D 160
Fly 325 QPASSPRRVAVPVLVKDGKPC 345
....|||||::||||:||:||
Zfish 161 PYLLSPRRVSIPVLVRDGRPC 181
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C170576040 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X524 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.840 |
|
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