DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and dlx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001008061.1 Gene:dlx2 / 493423 XenbaseID:XB-GENE-852891 Length:285 Species:Xenopus tropicalis


Alignment Length:376 Identity:78/376 - (20%)
Similarity:136/376 - (36%) Gaps:117/376 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAVKSVSSFRLASLLRRENDPSAAMKLFRN---PDPEST-----NPKRPFRYSLLCYDIIITKLG 58
            |.:..|.||  |.:.::.:||..   |.||   ..|:|.     |.|..        :|.....|
 Frog   235 SRIPLVRSF--ADIGKKHSDPHL---LERNGILASPQSAPGNLDNSKSG--------EIKGNGSG 286

  Fly    59 GSKM-----FDELDQVLLHLKTDTRIVPTEIIFCNV----INFFGRG------------------ 96
            ||:.     |.::|...:      |.:||.....||    ::|..|.                  
 Frog   287 GSRENSTVDFSKVDMNFM------RKIPTGAEASNVLVGEVDFLERPIIAFVRLAPAVLLTGLTE 345

  Fly    97 -KLPSRALHMF----DEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER---LSSIDEFGKPDAC 153
             .:|:|.|.:.    .:.|||  ....:|:.:|::..:......|.|:|   ||.||||  .|..
 Frog   346 VPVPTRFLFLLLGPAGKAPQY--HEIGRSIATLMTDEIFHDVAYKAKDRNDLLSGIDEF--LDQV 406

  Fly   154 TYNILIHGCSQSGCFDDALKL-----FDEMVKKKV-------KPT-GVT--------------FG 191
            |  :|     ..|.:|.::::     .....|:|:       .|| |.|              .|
 Frog   407 T--VL-----PPGEWDPSIRIEPPKSVPSQEKRKIPVFHNGSTPTLGETPKEAAHHAGPELQRTG 464

  Fly   192 TLIHGLCKDSRVKEALKMK--HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKI 254
            .|..||..|.:.|....:.  .|.|.:..:...:.:|.:.:..:...|      .|..||.||:|
 Frog   465 RLFGGLILDIKRKAPFFLSDFKDALSLQCLASILFLYCACMSPVITFG------GLLGEATEGRI 523

  Fly   255 KVDAAIYSTLISSL---IKAGR------SNEVSMILEEMSEKGCKPDTVTY 296
            ....:::...::.:   :.||:      |....::.|::..|.|:...::|
 Frog   524 SAIESLFGASLTGIAYSLFAGQPLTILGSTGPVLVFEKILYKFCRDYQLSY 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 8/52 (15%)
dlx2NP_001008061.1 DLL_N 29..107 CDD:463567
Homeodomain 128..184 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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