DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and eve

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_001238161.2 Gene:eve / 4578234 VectorBaseID:AGAMI1_002456 Length:354 Species:Anopheles gambiae


Alignment Length:288 Identity:73/288 - (25%)
Similarity:109/288 - (37%) Gaps:71/288 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 YAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMG 230
            |:|..|.|.   :|..|...:|           .|..|.|.|:.|   :|.|...::..:..|.|
Mosquito     7 YSMDALQHR---ETSVGLAVDL-----------MAHQYSSKASPP---LSPLSDCNSPPSSDHGG 54

  Fly   231 NMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPT 295
            |         :...||.   ...|:.|..||:.|:..||:.|.::.|:|.|.|..||:.::|..:
Mosquito    55 N---------NQQPPLD---PSVRRYRTAFTRDQLARLEKEFYKENYVSRPRRCELAAQLNLPES 107

  Fly   296 QVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPA--------------------SSPRRVAVPVLVK 340
            .:|:||||.|.|.|||....|......::.||                    .:|....:||:..
Mosquito   108 TIKVWFQNRRMKDKRQRIAVAWPYAAVYSDPAFAASILQAAANSVGMPYGYPPAPMLTQMPVIPP 172

  Fly   341 DGKPCSGNNSSSQSQQHGT-------------NSTSAGNNTGSANNGNANSGIVSVTANVSGGLN 392
            ...|  |.||.|.|....|             ..|:|.:...:...|....|:.|...::     
Mosquito   173 PVVP--GANSMSASAHAFTAYGYPRYTPYPLPQRTTATSLPVAPGTGPTTPGVYSAPNSM----- 230

  Fly   393 LITGDAPNS-HSP-DTSSSLLASYGTVG 418
            |:||..|.| ::| ..|.|......|||
Mosquito   231 LVTGSMPPSPYAPLSMSKSQTPPQDTVG 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 22/55 (40%)
eveXP_001238161.2 Homeodomain 66..122 CDD:459649 22/55 (40%)

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