Protein Alignment scro and LOC4576841

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_001230938.4
• Gene: LOC4576841 / 4576841
• VectorBaseID: AGAMI1_003921
• Length: 540
• Species: Anopheles gambiae
• Alignment Length: 370
• Identity: 85/370 - (22%)
• Similarity: 129/370 - (34%)
• Gaps: 130/370 - (35%)

  Fly    49 HTAISQHHQVDTSTKLNTNETSTQNTV-----STAAA---------------------------- 80
            :|..|.::..:::|.|.|:.|::.||.     ||||.
Mosquito   143 NTVTSPNNSGNSATTLTTSTTTSSNTTKPSSGSTAAEGVKSFSIADILGRDAEAASREGAREPSP 207

  Fly    81 ---------AAVAHHHHNLSSIH---HLQNLHSQHQSTLFNSNHST------------------- 114
                     |:::|||.:|:..|   ||...|..|     :.:||:
Mosquito   208 PPINPALHHASLSHHHLHLTGHHPAAHLAAAHHHH-----HHHHSSSTLQQAASKIVRPWDHLRG 267

  Fly   115 PFSVTDILSPIEESYR---KLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPG 176
            |..|...|.|....|.   .|:.:......||:.:......|...:       |...|:...|..
Mosquito   268 PIPVRPFLPPALLHYEHRLALDYHQQLQEHFRAQAQLLRHMSMDII-------PSESGSERSSSA 325

  Fly   177 VQTYCGP-----TDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLA 236
            ....|.|     :|:.|   |.:...:|:...|.:|.          :...||.....|..|| |
Mosquito   326 ASDCCSPEIGRGSDHQS---HQSSQSSSSGVGGGSAG----------AGDGSGRSGANGGASG-A 376

  Fly   237 ACSVSDSKPLQFPL--------------------------------AQRRKRRVLFTQAQVYELE 269
            |.|.|.:.|...||                                .::||.|..||..|::|||
Mosquito   377 AKSGSKTAPNGTPLDALFQMTNKNFDESNEDSEQSHLNLFANRPQPKKKRKSRTAFTNHQIFELE 441

  Fly   270 RRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE 314
            :||..|:|||..:|:.:|:.:.|:..||..||||.|.|.||..:|
Mosquito   442 KRFLYQKYLSPSDRDEIAAALGLSNAQVITWFQNRRAKLKRDMEE 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	26/55 (47%)
LOC4576841	XP_001230938.4	None