Protein Alignment scro and hoxc8a

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001005771.1
• Gene: hoxc8a / 449648
• ZFINID: ZDB-GENE-990415-114
• Length: 250
• Species: Danio rerio
• Alignment Length: 242
• Identity: 56/242 - (23%)
• Similarity: 84/242 - (34%)
• Gaps: 83/242 - (34%)

  Fly   148 SSSINSPGTLTTSTMANPYAMGTLYHSPGVQTY----------CGPTDNLSLAGHYTDMRNSASW 202
            ::.|::||     ...||.|:..  |....:.|          .|.....:|| .|.|.::|
Zfish    64 TTGISNPG-----YQQNPCALAC--HGDATKFYGYEALPRQPLYGTQQEATLA-QYPDCKSS--- 117

  Fly   203 YGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQ-----RRKRRVLFTQ 262
                            :|:..|        .|....|.:.|..|.||..:     ||..|..:::
Zfish   118 ----------------NSTNPG--------EGQGHLSQNSSPSLMFPWMRPHAPGRRNGRQTYSR 158

  Fly   263 AQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPA 327
            .|..|||:.|....||:...|..::..:.||..||||||||.|.|.|:        |.|
Zfish   159 YQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRMKWKK--------ENN------ 209

  Fly   328 SSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNG 374
                        ||..|.....:.:::::.       ||..|.|..|
Zfish   210 ------------KDKFPGQRGEAEAEAEEE-------GNEDGEAEEG 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/55 (40%)
hoxc8a	NP_001005771.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	112..152		12/66 (18%)
		Antp-type hexapeptide. /evidence=ECO:0000255	138..143		2/4 (50%)
		Homeodomain	150..206	CDD:459649	22/55 (40%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..250		10/65 (15%)