DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and DBX2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001004329.2 Gene:DBX2 / 440097 HGNCID:33186 Length:339 Species:Homo sapiens


Alignment Length:321 Identity:78/321 - (24%)
Similarity:114/321 - (35%) Gaps:101/321 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 PPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASW 202
            ||:|          :.|.|...:..|.   :..|..||.....|...:.:|.||         :.
Human    56 PPAP----------HDPATALATAGAQ---LRPLPASPVPLKLCPAAEQVSPAG---------AP 98

  Fly   203 YGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKP---------------------- 245
            ||:     |:|...|..|:.|..:.  |...|...|:...|.|                      
Human    99 YGT-----RWAFQVLSPSADSARLP--GRAPGDRDCTFQPSAPAPSKPFLLSTPPFYSACCGGSC 156

  Fly   246 ------LQFP--------LAQ------RR--KRRVLFTQAQVYELERRFKQQRYLSAPEREHLAS 288
                  ..||        |.|      ||  .||.:|::.|...||:.|::|:|:|..:|:.||.
Human   157 RRPASSTAFPREESMLPLLTQDSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAI 221

  Fly   289 LIHLTPTQVKIWFQNHRYKCKRQAKEK------AMAEQNQHNQPASSPRRVAVPVLVKDGKPCSG 347
            .:.|..:||||||||.|.|. |.:|||      .:.|......|.|   |.|:      |.|...
Human   222 NLGLKESQVKIWFQNRRMKW-RNSKEKEVLSNRCIQEVGLQEDPLS---RSAL------GFPSPC 276

  Fly   348 NNSSSQSQQHGT-----NSTSAGNNTGSANNG----NANS---GIVSVTANVSGGLNLITG 396
            .:.....|||.:     ||..........::|    .|||   .:...:...:|...::||
Human   277 PSIWDVPQQHSSPRWRENSPEPSERLIQESSGAPPPEANSLQGALYLCSEEEAGSKGVLTG 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 25/57 (44%)
DBX2NP_001004329.2 PRK12323 <3..>146 CDD:481241 25/118 (21%)
Homeodomain 189..243 CDD:459649 24/54 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..318 9/35 (26%)

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