Protein Alignment scro and HHEX

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Alignment Length: 341
• Identity: 89/341 - (26%)
• Similarity: 135/341 - (39%)
• Gaps: 63/341 - (18%)

  Fly    74 TVSTAAAAAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVT-DILSPIEESYRKLEL--N 135
            |.|:.||.::.:.....||.|..|:.....||         |.:|| .|.:|...:..|..|  .
  Fly     5 TKSSKAAFSIENILEQKSSSHRSQSRRGSSQS---------PVAVTAGIATPHALAMPKASLATG 60

  Fly   136 GNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTD----- 195
            .:..:|..|.||:::|..   |:....|..|||.::..|    ....|| :|.....|.|
  Fly    61 SSSAAPTPSPSSATNIYD---LSREAAAAQYAMKSMDSS----AVLAPT-SLRFNPIYPDPASLF 117

  Fly   196 ------MRNSASWYGSTANDPRFAISRLMSSSA-----------SGTMSHMG--NMSGLAACSVS 241
                  ::.:.|.:     .|.|..:.:.:::|           ..||...|  |.:..||....
  Fly   118 YQQVLQLQKNPSLF-----MPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYC 177

  Fly   242 DSKP-LQFPLA----QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWF 301
            ::.| ..|.::    :|:..::.||..|...||.||...:|||..||.|||..:.||..|||.||
  Fly   178 NAYPAASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWF 242

  Fly   302 QNHRYKCKRQ--AKEKAMAEQNQHNQPASSPRRV---AVPVLVKDGKPCSGNNSSSQSQQHGTNS 361
            ||.|.|.:|.  :|..|.|:.........||...   :||||    ...||:....||.:.....
  Fly   243 QNRRAKWRRANLSKRSASAQGPIAGAAVGSPSSASSSSVPVL----NLGSGSRCGQQSDEEDRMY 303

  Fly   362 TSAGNNTGSANNGNAN 377
            .|..:.....:.|.|:
  Fly   304 LSEDDEDDDEDEGEAD 319

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	26/55 (47%)
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	26/50 (52%)