DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and NK7.1

DIOPT Version :9

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001247103.1 Gene:NK7.1 / 41747 FlyBaseID:FBgn0024321 Length:721 Species:Drosophila melanogaster


Alignment Length:526 Identity:116/526 - (22%)
Similarity:181/526 - (34%) Gaps:148/526 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 EEDLVMSLSPKDTLIHTAISQHHQVDTSTKLNTNETSTQNTVSTAAAAAVAHHH----------- 87
            ::.|...::|:.:.:|....|..|.....:......||....:|.......|.|           
  Fly   128 QKQLEAVVAPRPSSVHPQHQQPQQQTVQLQQQRRSVSTPAITTTPGPPTNWHAHVYDRLPPHPTP 192

  Fly    88 HNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSIN 152
            |:::.|..:..:..:.....|::..... |...||.|.:|.           .|.||:|.|.|..
  Fly   193 HSIADILGMSFVKKERPEVAFDAQGPAK-SPNSILKPYQEQ-----------QPIRSSSISMSDA 245

  Fly   153 S--------------------PGTLTTSTMANPY------------------------------A 167
            |                    ..|:|.:|:|.|.                              .
  Fly   246 SEEESAAVAGATSAATAAAAVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGK 310

  Fly   168 MGTLYHSPG---------VQTYCGPTDNLSLAGHYTD------MRNSASWYGSTANDPRFAISRL 217
            ..|...|.|         ..|...|.| :|..|....      |.|::|..||..|       ..
  Fly   311 SATKKESSGKPAAKKKKLSSTVALPPD-ISPTGSSDSLMRDKLMANNSSSPGSNVN-------AQ 367

  Fly   218 MSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPE 282
            |.|:|:.|:.          .:..||........:::|.|..||..|::|||:.|:.::||||.|
  Fly   368 MQSNANSTLE----------TTEDDSDSGSTDARRKKKARTTFTGRQIFELEKMFENKKYLSASE 422

  Fly   283 REHLASLIHLTPTQVKIWFQNHRYKCKRQ---AKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKP 344
            |..:|.|:.:|.|||||||||.|.|.|:|   ...:|...::.:.:|.::......|    .|:|
  Fly   423 RTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGATGTATTTP----SGEP 483

  Fly   345 CSGNNSSSQSQQHGTNSTSA-------GNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSH 402
            ....:|::.|...|..:|.|       ..|.||.||.|         ..::..:|...|..|...
  Fly   484 TDKRSSNATSPTVGNAATIAEIKKSPKSPNRGSNNNNN---------NTLNNNVNNSEGKVPAKQ 539

  Fly   403 SPDTSSSLLASY--GTVGGSNVAML--------QQPCNNTLMSNSLAMAYRNQNNFISNGHQQQC 457
            |.......|.:.  .||..:|.|..        |:|......:||      |:|..:   ||:..
  Fly   540 STTKIKKQLNALLEKTVKTANQAHRSAELESSDQKPAVEKRPNNS------NENQLL---HQRLH 595

  Fly   458 GGYLPL 463
            ...:||
  Fly   596 QHAIPL 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeobox 256..309 CDD:278475 28/52 (54%)
NK7.1NP_001247103.1 Homeobox 397..449 CDD:278475 28/51 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442253
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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