Protein Alignment scro and Dfd

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_477201.1
• Gene: Dfd / 40832
• FlyBaseID: FBgn0000439
• Length: 586
• Species: Drosophila melanogaster
• Alignment Length: 530
• Identity: 114/530 - (21%)
• Similarity: 177/530 - (33%)
• Gaps: 192/530 - (36%)

  Fly    40 SLSPKDTLIHTAISQHHQVDTSTKLNTNETSTQNTVSTAAAAAVAHHHHNLS-SIHHLQNL---- 99
            |:.|.| ::...::.||        |.:..|..:|.|      :.|||.|.: |.||..:.
  Fly    79 SMHPAD-MVSDYMAHHH--------NPHSHSHSHTHS------LPHHHSNSAISGHHQASAGGYS 128

  Fly   100 ------------HSQ-----HQSTLFNSNHSTPF-SVTDILSPIEESYRKLELNGNPPS---PFR 143
                        ||.     |||..:..:|:..| |...:.|.        ..||..|:   |..
  Fly   129 SNYANATPPSHPHSHPHAHPHQSLGYYVHHAPEFISAGAVHSD--------PTNGYGPAANVPNT 185

  Fly   144 SN----SSSSSINSPGTLTTSTMANPY-------------AMGTLY---HSPGVQ-----TYCGP 183
            ||    ..|.::...|.:..|  ||.|             ::|:.:   |||..|     ..|..
  Fly   186 SNGGGGGGSGAVLGGGAVGGS--ANGYYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQCSS 248

  Fly   184 TD---NLSL------------------AGHYTD---MRNSASWYGSTANDPRFAISRLMSSSASG 224
            |:   |.:|                  ||....   ||......|| .||......|||...:..
  Fly   249 TEPPTNTALGLQELGLKLEKRIEEAVPAGQQLQELGMRLRCDDMGS-ENDDMSEEDRLMLDRSPD 312

  Fly   225 TMSHMGNMSGLA--------ACSVSDSKPLQFPLAQR-----------------RKRRVLFTQAQ 264
            .:....|...|.        ....:|.:.:.:|..::                 :::|..:|:.|
  Fly   313 ELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQPGMEPKRQRTAYTRHQ 377

  Fly   265 VYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ------------------ 311
            :.|||:.|...|||:...|..:|..:.|:..|:||||||.|.|.|:.
  Fly   378 ILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNTKNVRKKTVDANG 442

  Fly   312 --------------AKEKAMAEQNQHNQPASSPRRVAVPVL-----------VKDGKPCSGN--- 348
                          :|::..|:|.|.:|...:.:   .||:           :.|.....||
  Fly   443 NPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQ---TPVMNECIRSDSLESIGDVSSSLGNPPY 504

  Fly   349 --------NSSSQSQQH--GTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHS 403
                    :|...||||  ..|:..:|||..:.||.|:|.. .:...|..|..||      :.|.
  Fly   505 IPAAPETTSSYPGSQQHLSNNNNNGSGNNNNNNNNNNSNLN-NNNNNNQMGHTNL------HGHL 562

  Fly   404 PDTSSSLLAS 413
            ....|.|:.:
  Fly   563 QQQQSDLMTN 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	22/55 (40%)
Dfd	NP_477201.1	Homeodomain	367..423	CDD:459649	22/55 (40%)