Protein Alignment scro and mnx2b

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001315287.1
• Gene: mnx2b / 406206
• ZFINID: ZDB-GENE-040415-2
• Length: 328
• Species: Danio rerio
• Alignment Length: 304
• Identity: 82/304 - (26%)
• Similarity: 126/304 - (41%)
• Gaps: 62/304 - (20%)

  Fly   113 STPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTL----TTSTMANPYAMGTLYH 173
            |..|.:..:|:  ||.:|    .....||  ..||.|...||.:.    |.|....|   |.::.
Zfish     4 SKNFRIDALLA--EEPHR----GSREVSP--GLSSDSPTGSPVSCRRGDTPSPRGTP---GAIHL 57

  Fly   174 SPGVQTYCG----PTDNL-SLAGHYTDMRNSASWYGSTANDPRFAIS-----------RLMSSSA 222
            .||:....|    |...| |:.|.||......|..|  ...|..|.:           :|.:::.
Zfish    58 QPGIIPKPGLLNLPHPGLTSIPGMYTTPMYPISALG--GQHPALAYTGFTQLTQPYPEQLKAAAM 120

  Fly   223 SGT--MSHMGNMSGLA-------AC---SVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQ 275
            :|:  :.|. ..:|:.       .|   |:..:.|....:.:.|:.|..||..|:.|||.:||..
Zfish   121 AGSLPLEHW-IRAGIMVPRLPDYTCEWGSIQMTAPQSGLMGKCRRPRTAFTSQQLLELENQFKLN 184

  Fly   276 RYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCK--RQAKEKAMAEQNQHNQPASSP------RR 332
            :|||.|:|..:|:.:.||.|||||||||.|.|.|  |:|||:|...:.:..:..:.|      |.
Zfish   185 KYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSRKAKEQAAQVEVERQRGGTKPSGRDSRRA 249

  Fly   333 VAVPVL------VKDGKPCSGNNSSSQSQQHG--TNSTSAGNNT 368
            .|.|.:      .::.:....:....:..||.  .||.|...:|
Zfish   250 PAAPSVEEQEEEEEEEEEIDEDEEDEEDGQHKFINNSLSVSRST 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	30/57 (53%)
mnx2b	NP_001315287.1	Homeodomain	163..219	CDD:459649	29/55 (53%)