Protein Alignment scro and CG34031

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001246894.1
• Gene: CG34031 / 3885665
• FlyBaseID: FBgn0054031
• Length: 219
• Species: Drosophila melanogaster
• Alignment Length: 225
• Identity: 60/225 - (26%)
• Similarity: 93/225 - (41%)
• Gaps: 45/225 - (20%)

  Fly    95 HLQNLHSQHQSTLFNSNHST------PFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINS 153
            ||:...|:..|.:..|..:.      .||:..|||..|                 ::||.:|:..
  Fly     4 HLEQDKSRLNSCIEKSIQTKKKGKLGAFSIDSILSTSE-----------------AHSSQNSLPK 51

  Fly   154 PGT-LTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLA-GHYTDMRNSASWYGSTANDPRFAISR 216
            ..| :|:|.::..||...........    |..|..|. ||  ..|...::.|||       :||
  Fly    52 DNTNVTSSDISKLYAFSFTQEGNNKT----PLTNFDLCQGH--PRRLPITFDGST-------VSR 103

  Fly   217 LMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAP 281
            .:..:.|...|::.|.:.|      ..|.|:.....|:.|:. ::.:|:..||..|...:|||..
  Fly   104 FVWRTESILPSYITNSTNL------QEKQLRKRFTDRKPRQA-YSASQLERLENEFNLDKYLSVS 161

  Fly   282 EREHLASLIHLTPTQVKIWFQNHRYKCKRQ 311
            :|..|:..:.||..|||.||||.|.|.|:|
  Fly   162 KRVELSKSLSLTEVQVKTWFQNRRTKWKKQ 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	21/55 (38%)
CG34031	NP_001246894.1	Homeodomain	134..190	CDD:459649	22/56 (39%)