Protein Alignment scro and Barx1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001102350.1
• Gene: Barx1 / 364680
• RGDID: 1310884
• Length: 254
• Species: Rattus norvegicus
• Alignment Length: 143
• Identity: 42/143 - (29%)
• Similarity: 67/143 - (46%)
• Gaps: 22/143 - (15%)

  Fly   211 RFAISRLMSSSASGTMSHMG-NMSGLAACSVSDSKPLQFPLAQR----------------RKRRV 258
            :|.::.|..|.....:...| .|.|.|..|   ..||:..|..:                |:.|.
  Rat    86 KFPLAPLGCSGLGSALLAAGPGMPGTAGTS---HLPLELQLRGKLEAAGSGEPGTKAKKGRRSRT 147

  Fly   259 LFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQH 323
            :||:.|:..||:||::|:|||.|:|..||..:.|:..|||.|:||.|.|.|:...:....|  ..
  Rat   148 VFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLE--SP 210

  Fly   324 NQPASSPRRVAVP 336
            .:|...|::.::|
  Rat   211 TKPKGRPKKNSIP 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	26/55 (47%)
Barx1	NP_001102350.1	Homeodomain	143..199	CDD:459649	26/55 (47%)