Protein Alignment scro and Meox1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_063125617.1
• Gene: Meox1 / 363684
• RGDID: 1308911
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 354
• Identity: 71/354 - (20%)
• Similarity: 109/354 - (30%)
• Gaps: 125/354 - (35%)

  Fly   111 NHSTPFSVTDIL-SPIEESYRKLELNGNPPSPFRSNSSS---SSINSPGTLTTSTMANPYAMGTL 171
            |...|..|...| :|..|......|...||:||..:..|   ::...|...|:...|.|:::...
  Rat    11 NPQPPAPVWGCLRNPHSEGSSASGLPHYPPTPFSFHQKSDFPATAAYPDFSTSCLAATPHSLPRA 75

  Fly   172 ----------------YHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSS 220
                            :|.|           :|.||...::..:.|             :|.|.:
  Rat    76 ERIFNEQHPAFPQTPDWHFP-----------ISEAGQRLNLGPAGS-------------AREMGA 116

  Fly   221 SASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQ---QRYLSAPE 282
            .:.|.:...|.:.  ..|.|..:      :|...:::          |.||.|:   |..:..||
  Rat   117 GSPGLVDGTGGLG--EDCMVLGT------IAHETEKK----------LSRRKKERSGQSVVPEPE 163

  Fly   283 REHLA----SLIHLTPTQVKIW----FQNHRYKCKRQAKEKAMAEQNQ---HNQPASSPRRVAVP 336
            .|..|    |....|....:.|    |...|.:|.:        :|||   :.:|...|  ...|
  Rat   164 NEVEACEGGSARVPTGAGPRGWRLCSFSEFRVRCSK--------DQNQERLNERPFQLP--PPTP 218

  Fly   337 VLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNS 401
            .|                       ||:|....:..:...:..:.||     |.||...|.|  .
  Rat   219 TL-----------------------TSSGPTQAACAHSYVDVKLPSV-----GALNFPEGLA--Q 253

  Fly   402 HSPDTSS---------SLLASYGTVGGSN 421
            |.|..||         :||.|.|..|..|
  Rat   254 HRPSLSSPFPRASIFHTLLNSTGPSGLGN 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	15/66 (23%)
Meox1	XP_063125617.1	None