DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and HOXB8

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_076921.1 Gene:HOXB8 / 3218 HGNCID:5119 Length:243 Species:Homo sapiens


Alignment Length:267 Identity:68/267 - (25%)
Similarity:96/267 - (35%) Gaps:77/267 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ELNGNP-----PSPFRSNSSSSSI----NSPGTLTTST-MANPYAMGTLYHSPGVQTYCGPTDNL 187
            :|.|.|     ||...|....|.|    :.|.:|:|:. ..||.|: ..:..||......|....
Human    31 DLGGRPTVVYGPSSGGSFQHPSQIQEFYHGPSSLSTAPYQQNPCAV-ACHGDPGNFYGYDPLQRQ 94

  Fly   188 SLAGHYTDMRNSASWYGSTANDP---RFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQ-F 248
            ||.|               |.||   ::|..:|.::|..|..         |..|.....|.| |
Human    95 SLFG---------------AQDPDLVQYADCKLAAASGLGEE---------AEGSEQSPSPTQLF 135

  Fly   249 P------LAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYK 307
            |      .|.||:.|..:::.|..|||:.|....||:...|..::..:.||..||||||||.|.|
Human   136 PWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMK 200

  Fly   308 CKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSAN 372
            .|:        |.|:...|:|.               |.......|..:....         :|:
Human   201 WKK--------ENNKDKFPSSK---------------CEQEELEKQKLERAPE---------AAD 233

  Fly   373 NGNANSG 379
            .|:|..|
Human   234 EGDAQKG 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 22/55 (40%)
HOXB8NP_076921.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeodomain 147..203 CDD:459649 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 10/70 (14%)

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