DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and HLX

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_068777.1 Gene:HLX / 3142 HGNCID:4978 Length:488 Species:Homo sapiens


Alignment Length:442 Identity:104/442 - (23%)
Similarity:170/442 - (38%) Gaps:119/442 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 QNTVSTAAAAAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTP-FSVTDI-------LSPIEES 128
            :.....:|||..||    |.|:|.    |:..|:...:....|| .:.:::       |||:..:
Human    62 EGLAGASAAALTAH----LGSVHP----HASFQAAARSPLRPTPVVAPSEVPAGFPQRLSPLSAA 118

  Fly   129 Y----------RKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMG-------------- 169
            |          ::......||.|.|:.:.     .|....|..:.||:..|              
Human   119 YHHHHPQQQQQQQQPQQQQPPPPPRAGAL-----QPPASGTRVVPNPHHSGSAPAPSSKDLKFGI 178

  Fly   170 ----TLYHSPGVQTYCGPTDNLSL------AG-HYTDMRNSASWYGSTANDPRFAISRLMS---S 220
                :....|.|:......|..||      || |.:.::.||..:.::. ||....|.::|   |
Human   179 DRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGVHLSGLQPSAGQFFASL-DPINEASAILSPLNS 242

  Fly   221 SASGTMSH--MGNMSGLAACSVSDSKPLQFPLAQRRKR---RVLFTQAQVYELERRFKQQRYLSA 280
            :...::.|  .....|..|....|:.|..:    :|||   |.:|:..|...||:||:.|:|::.
Human   243 NPRNSVQHQFQDTFPGPYAVLTKDTMPQTY----KRKRSWSRAVFSNLQRKGLEKRFEIQKYVTK 303

  Fly   281 PEREHLASLIHLTPTQVKIWFQNHRYKCK-------RQAKEKAMAEQNQHNQPAS-------SPR 331
            |:|:.||:::.||..|||:||||.|.|.:       ::.|:|...|:.....||:       ||.
Human   304 PDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAADGEQDERSPS 368

  Fly   332 RVAVPVLVKDGKPCSGNNSS---------------SQSQQHGTN-----STSAGNNTGSANNGNA 376
            |       .:|:..|.::.|               |:...|.|.     .|.|.....||.:|.:
Human   369 R-------SEGEAESESSDSESLDMAPSDTERTEGSERSLHQTTVIKAPVTGALITASSAGSGGS 426

  Fly   377 NSGIVSVTANVSGGLNLITGDAPNSHSPDTSSSLLASYGTVGGSNVAMLQQP 428
            :.|         ||.:.....|.:..|..||:...:|.|..|.|.:....||
Human   427 SGG---------GGNSFSFSSASSLSSSSTSAGCASSLGGGGASELLPATQP 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 27/65 (42%)
HLXNP_068777.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..173 10/59 (17%)
Homeodomain 273..333 CDD:459649 27/59 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..488 32/155 (21%)

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