Protein Alignment scro and nkx2.2a

DIOPT Version :9

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001295569.1
• Gene: nkx2.2a / 30697
• ZFINID: ZDB-GENE-980526-403
• Length: 273
• Species: Danio rerio
• Alignment Length: 296
• Identity: 110/296 - (37%)
• Similarity: 137/296 - (46%)
• Gaps: 87/296 - (29%)

  Fly    96 LQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTS 160
            |||:..        :|..|.|||.|||...:.:..:..:.|..    .....|.:..:||.|..|
Zfish     2 LQNMSL--------TNTKTGFSVKDILDLPDTNDEEGSITGTE----EDTEGSEATKTPGVLVQS 54

  Fly   161 TMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGT 225
            .:.|                   ..||.|...:.|  ||.:.|           :|.:::    |
Zfish    55 PLEN-------------------VQNLPLKNPFYD--NSDNPY-----------TRWLAT----T 83

  Fly   226 MSHMGNMSGLAACSVSDSKPLQFPLA------------------QRRKRRVLFTQAQVYELERRF 272
            .|...::.||:|.|...|.....|.|                  ::|||||||::||.|||||||
Zfish    84 DSIQYSLHGLSANSQDTSAKSPEPSADESPDNDKETSSNGSDSGKKRKRRVLFSKAQTYELERRF 148

  Fly   273 KQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPV 337
            :|||||||||||||||||.||||||||||||||||.||...||.|...:     ..|||||||||
Zfish   149 RQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTH-----LPSPRRVAVPV 208

  Fly   338 LVKDGKPCSGNNS----------------SSQSQQH 357
            ||:|||||....:                |:||.||
Zfish   209 LVRDGKPCHTLKAQDLAATFQAGIPFSAYSAQSLQH 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeobox	256..309	CDD:278475	47/52 (90%)
nkx2.2a	NP_001295569.1	COG5576	93..218	CDD:227863	76/129 (59%)
		Homeobox	132..185	CDD:278475	47/52 (90%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170576039
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0842
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X524
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.740