Protein Alignment scro and Nkx3-1

DIOPT Version :9

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001029316.1
• Gene: Nkx3-1 / 305999
• RGDID: 1305369
• Length: 238
• Species: Rattus norvegicus
• Alignment Length: 251
• Identity: 71/251 - (28%)
• Similarity: 101/251 - (40%)
• Gaps: 89/251 - (35%)

  Fly   110 SNHSTPFSVTDILSPIEESYRKLELNGNP--------PSPFRSNSS------SSSINSPGTLTTS 160
            |...|.|.:.|||.  :.:.|:   .|.|        |.|.|.::|      .||:
  Rat    27 SKRLTSFLIQDILR--DHAERR---GGQPSTPQHQCQPDPKRDSASELDEAEGSSV--------- 77

  Fly   161 TMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGT 225
                     ||...||:::  .||:..:                .|.:|..|.
  Rat    78 ---------TLEDPPGIRS--SPTETRA----------------ETESDAHFE------------ 103

  Fly   226 MSHMGNMSGLAACS---VSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLA 287
                   :.|..|.   |..|.| |.....:::.|..|:..||.||||:|..|:|||||||.|||
  Rat   104 -------TYLLDCEHTPVLSSAP-QVTKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLA 160

  Fly   288 SLIHLTPTQVKIWFQNHRYKCKRQ--AKEKAMAEQNQHNQPASSPRRVAVPVLVKD 341
            ..:.||.|||||||||.|||.||:  :::..:.|:|.         .:::|.|..|
  Rat   161 KNLKLTETQVKIWFQNRRYKTKRRQLSEDLGVLEKNS---------TLSLPTLKDD 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeobox	256..309	CDD:278475	34/52 (65%)
Nkx3-1	NP_001029316.1	Homeobox	129..182	CDD:278475	34/52 (65%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166336905
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0842
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.740