DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and dlx2b

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_571372.1 Gene:dlx2b / 30557 ZFINID:ZDB-GENE-980526-18 Length:276 Species:Danio rerio


Alignment Length:327 Identity:81/327 - (24%)
Similarity:134/327 - (40%) Gaps:69/327 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 NLHSQH-QSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTST 161
            ::|:.| .|:.|::.|.:..|.|..:|.:.:|           |.|.|:.:.....:......|.
Zfish    11 DMHTNHITSSSFSTVHKSQDSPTLPVSTVTDS-----------SFFSSSQTGHCAGTAYAQLASY 64

  Fly   162 MANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTM 226
            ..:|..:|.:::||  :.|     :|..|..|       ..||:            ..:|:|.|.
Zfish    65 SYHPGTVGNVHYSP--KAY-----DLGYASSY-------GAYGT------------YGASSSPTP 103

  Fly   227 SHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIH 291
            :............:.:.||.:.     ||.|.:::..|:..|:|||::.:||:.|||..||:.:.
Zfish   104 TEPEKEESEPEVRMVNGKPKKV-----RKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLG 163

  Fly   292 LTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQ---HNQPASSPRRVAVPVLVKDGKPCSGNNSSSQ 353
            ||.|||||||||.|.|.|:..|...:....|   .:.|:|||            .|.:|.:....
Zfish   164 LTQTQVKIWFQNRRSKFKKLWKNGEIPADQQVASGDSPSSSP------------PPQAGWDFPPN 216

  Fly   354 SQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVS--GGLNLITGDAPNS-HSPDTSSSLLASYG 415
            ..|:.      |:.......|..|:...|...|.|  ...|.:|...|:: ..|..||::  |.|
Zfish   217 PTQND------GDTVSEQPTGPPNTTAPSFLTNYSWYSSTNAVTHLQPSTLIQPHHSSAM--STG 273

  Fly   416 TV 417
            |:
Zfish   274 TI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 28/55 (51%)
dlx2bNP_571372.1 DLL_N 29..102 CDD:463567 20/109 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 97..123 4/25 (16%)
Homeodomain 126..182 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..238 11/64 (17%)

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