DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and evx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_571307.2 Gene:evx2 / 30479 ZFINID:ZDB-GENE-980526-215 Length:418 Species:Danio rerio


Alignment Length:468 Identity:101/468 - (21%)
Similarity:153/468 - (32%) Gaps:165/468 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 HQVDTSTKLNTNETSTQNTVSTAAAAAVAHHHHNLSSIHHLQNLHSQ-------HQSTLFNSNHS 113
            |......:|:....|..|.|  ..|...:.|...||......:||..       ...:||.::|:
Zfish    17 HSPVAGKRLSNLTDSAGNAV--LEALENSQHAGRLSPRITSASLHGDIPTKGKFEIDSLFGNHHN 79

  Fly   114 TPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQ 178
            ...|.|::.|  .||.:|:.|... .||....:|...:..|.                :.|||  
Zfish    80 DNTSSTEVSS--SESRKKINLYPE-VSPDSDMNSDVEVGCPS----------------HRSPG-- 123

  Fly   179 TYCGPTDNLSLAGH-------YTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLA 236
                     |::.|       ::|..:..|      |....::|.|..:|       |||.|   
Zfish   124 ---------SISQHKENNNKGFSDSNSGGS------NTSSSSLSNLNGNS-------MGNSS--- 163

  Fly   237 ACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWF 301
              |.||         |.|:.|..||:.|:..||:.|.::.|:|.|.|..||:.::|..|.:|:||
Zfish   164 --SSSD---------QVRRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWF 217

  Fly   302 QNHRYKCKRQAKEKAM-----------------------------AEQNQHNQP----------- 326
            ||.|.|.|||  ..||                             :....|..|           
Zfish   218 QNRRMKDKRQ--RLAMSWPHPADPSFYTYMMTHAAATGSLPYPFHSHMPLHYYPHVGVTAAAAAA 280

  Fly   327 -----ASSPRRVAV---------------PVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSA 371
                 ||||...::               |.|:     ||..:........|.||::|.:...:|
Zfish   281 AASGAASSPFATSIRPLDTFRALSHPYSRPELL-----CSFRHPGLYQSPAGLNSSAAASAAAAA 340

  Fly   372 NNGNANSGIVSVTANVSGGLNLITGDAPNSHSPDTSSSLLASYGTVGGSNVAMLQQPCNNTLMSN 436
            ....|.....|.|...|         ..:.||...:|:|        ||..:.....|.      
Zfish   341 AAAAAAVSAPSATGPCS---------CLSCHSSQAASAL--------GSRSSSSDFTCT------ 382

  Fly   437 SLAMAYRNQNNFI 449
              |...|:::.|:
Zfish   383 --ATGQRSESGFL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 23/55 (42%)
evx2NP_571307.2 Homeodomain 170..226 CDD:459649 23/55 (42%)

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