Protein Alignment scro and hoxb4a

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_571193.1
• Gene: hoxb4a / 30340
• ZFINID: ZDB-GENE-990415-105
• Length: 246
• Species: Danio rerio
• Alignment Length: 314
• Identity: 68/314 - (21%)
• Similarity: 104/314 - (33%)
• Gaps: 119/314 - (37%)

  Fly   105 STLFNSNHSTP-------FSVTDIL---SPIEESYRKLELNGNPPSPFRSNSSS-----SSINSP 154
            |.|.|||:..|       :|.:|.|   ||...|.::.:.:....|.:...|..     ||...|
Zfish     5 SYLINSNYVDPKFPPCEEYSQSDYLPSHSPDYYSAQRQDPSFQHESIYHQRSGCADPPYSSCQGP 69

  Fly   155 G-----------TLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTAN 208
            |           .|.|:.::.|                     |....|:.|         |...
Zfish    70 GQPAAVISPRGHVLPTTALSTP---------------------LPEPSHHCD---------SVTP 104

  Fly   209 DPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQR---------------RKRRV 258
            .|..|..:..:|..:.|:|             |...|:.:|..::               ::.|.
Zfish   105 SPPPACGQTPTSQNTSTVS-------------SRKDPVVYPWMKKVHVNIVSPNYSGGEPKRSRT 156

  Fly   259 LFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQH 323
            .:|:.||.|||:.|...|||:...|..:|..:.|:..|:||||||.|.|.|:           .|
Zfish   157 AYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCLSERQIKIWFQNRRMKWKK-----------DH 210

  Fly   324 NQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNAN 377
            ..|                      |:..:|....||  |:|..|..:|...|:
Zfish   211 KLP----------------------NTKIRSNSASTN--SSGCPTLCSNQSRAS 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	23/55 (42%)
hoxb4a	NP_571193.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	23..125		24/144 (17%)
		Antp-type hexapeptide	130..135		1/4 (25%)
		Homeodomain	152..208	CDD:459649	23/55 (42%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..246		11/55 (20%)