DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and TLX3

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_066305.2 Gene:TLX3 / 30012 HGNCID:13532 Length:291 Species:Homo sapiens


Alignment Length:313 Identity:75/313 - (23%)
Similarity:118/313 - (37%) Gaps:63/313 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAVKSVSSFRLASLL----------RRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIIT 55
            :|.:|..|.||....:          |.:..||..:.:        |||.  |..:|..:..|| 
Human    89 ISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGV--------TNPF--FAKTLQHWPHII- 142

  Fly    56 KLGGSKMFDEL-DQV----LLHLKT-DTR--IVPTEIIFCN----VINFFGRG---KLPSRALHM 105
            ::|..|...|: .||    |.:||| |::  :..:...:.|    :|....:|   |.||.|..:
Human   143 RIGDLKPAGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQKGIQQKRPSEAQSV 207

  Fly   106 -----FDEMPQ---YRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGC 162
                 |.|:.|   ...:|.|.||..|..::.......::::.|.  :||.|....|...|..|.
Human   208 ILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLP--EEFMKTLEKTGPQLTSGI 270

  Fly   163 SQS--GCFDDALKL--FDEMVKKKVKPTGVTFGTL-IHGLCKDSRVKEALKMKHDMLKVYGVRPT 222
            ...  |.:...||.  ||...|.:.|........| :..||::..:  ....||..::      |
Human   271 KGDWIGLYRQFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLL--LWIQKHTEVE------T 327

  Fly   223 VHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA---AIYSTLISSLIKAG 272
            |.:...|...|.|.|..|...| .|...:.:..:||   |:...|...|:|.|
Human   328 VDLVLKLKNKLLQAGRESLPVK-PDTVEKLRTHIDAIILALPDDLQGILLKTG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 7/22 (32%)
TLX3NP_066305.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
Homeodomain 167..223 CDD:459649 12/55 (22%)
Blue background indicates that the domain is not in the aligned region.

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