Protein Alignment scro and Nkx1-2

DIOPT Version :9

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001163947.1
• Gene: Nkx1-2 / 293568
• RGDID: 1306744
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 343
• Identity: 84/343 - (24%)
• Similarity: 117/343 - (34%)
• Gaps: 116/343 - (33%)

  Fly   110 SNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSI------------NSPGTLTTSTM 162
            |:|...|||.|||.|  :.:.:..|   ||....:..:..|:            |..|:..|
  Rat    14 SHHKISFSVLDILDP--QKFTRAAL---PPVRLAALEAKKSLVEVEAGEDACSGNPIGSQET--- 70

  Fly   163 ANPYAMGTLYHSPGVQTYCGPTDNLS-LAGHYTDMRNSAS----------WYGSTANDPRFAISR 216
              |.|:|            |.||..| :.|...:....|.          |.|:.|..
  Rat    71 --PDAVG------------GGTDPASPVEGSEAEEEEEAEDAGRAQRPERWQGAHAGS------- 114

  Fly   217 LMSSSASGTMSHMGNMSGLAACSVSDSKP------LQFPLAQRRKRRVLFTQAQVYELERRFKQQ 275
             :.:.|....:......||.|...|...|      .:...|:.|:.|..||..|:..||.:|:..
  Rat   115 -LEAGAVAVGTEESGADGLPASPGSPGSPRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRAT 178

  Fly   276 RYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVK 340
            ||||..||.:||..:.||.|||||||||.|.|.|:|             .|.:
  Rat   179 RYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-------------NPGA------------ 218

  Fly   341 DGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSPD 405
            ||                  :..||.:.......||          |:||....||.:|   .|.
  Rat   219 DG------------------AVQAGGSAPQPGTPNA----------VTGGGGSATGSSP---GPP 252

  Fly   406 TSSSL-LASYGTVGGSNV 422
            ...:| ..::.|...:||
  Rat   253 VPGALPFQTFPTYPATNV 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeobox	256..309	CDD:278475	28/52 (54%)
Nkx1-2	NP_001163947.1	Homeobox	160..213	CDD:395001	28/52 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166336897
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840