DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scro and Evx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_221512.6 Gene:Evx2 / 288155 RGDID:1305594 Length:474 Species:Rattus norvegicus


Alignment Length:437 Identity:89/437 - (20%)
Similarity:153/437 - (35%) Gaps:155/437 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 TLFNSNH-STPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMG 169
            ||||..| |:..:|:..::...||.:|       ||.:...::.:.::|...:..|.:.:|..:|
  Rat    75 TLFNLQHPSSESTVSSEIASATESRKK-------PSHYSEAAAEADMSSDVEVGCSALRSPSGLG 132

  Fly   170 TLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNM-- 232
            .....                      .|:|..|..:.:        :..::.|.|.|.:|::  
  Rat   133 AAQLK----------------------ENNAKGYAESGS--------VAGTTTSATGSGLGSLHG 167

  Fly   233 -----SGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHL 292
                 ||.||...|.|..   ...|.|:.|..||:.|:..||:.|.::.|:|.|.|..||:.::|
  Rat   168 GGGGNSGGAALGGSGSGS---GADQVRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNL 229

  Fly   293 TPTQVKIWFQNHRYKCKRQ---------------------------------------------- 311
            ..|.:|:||||.|.|.|||                                              
  Rat   230 PETTIKVWFQNRRMKDKRQRLAMSWPHPADPSFYTYMMTHAAATGSLPYPFHSHVPLHYYPHVGV 294

  Fly   312 AKEKAMAEQNQHNQPASSPRRVAV---------------PVLVKDGKPCSGNNSSSQSQQHGTNS 361
            ....|.|..:.....||||...::               |.|:     ||..:..    .:...:
  Rat   295 TAAAAAAAASGAAAAASSPFATSIRPLDTFRALSHPYSRPELL-----CSFRHPG----LYQAPA 350

  Fly   362 TSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNS----HSPDTSSSLLAS--------- 413
            |:||.|:.::....|.:...:.::..:.|.....|.||.|    ||..::::..|:         
  Rat   351 TAAGLNSAASAAAAAAAAAAAASSAAAAGAPPSGGSAPCSCLSCHSSQSAAAAAAAAAAALGSRG 415

  Fly   414 -----------YGTVGGSNVAMLQQPCNNTLMSNSLAMAYRNQNNFI 449
                       .||.|||:..     |:        |.|.|:::.|:
  Rat   416 GGGSGGGGGGGAGTAGGSDFG-----CS--------AAAPRSESGFL 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 23/55 (42%)
Evx2XP_221512.6 Homeodomain 191..247 CDD:459649 23/55 (42%)

Return to query results.
Submit another query.