DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and VENTX

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_055283.1 Gene:VENTX / 27287 HGNCID:13639 Length:258 Species:Homo sapiens


Alignment Length:283 Identity:69/283 - (24%)
Similarity:105/283 - (37%) Gaps:84/283 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LELNGNPPSPFRSNSSSSSINSPGTLTTSTMANP--------YAMGTLYHSPGVQTYCGPTDNLS 188
            :.|:.:||   |.....||..|...|:.|:.:.|        :::|:|   ||.    |.|    
Human     1 MRLSSSPP---RGPQQLSSFGSVDWLSQSSCSGPTHTPRPADFSLGSL---PGP----GQT---- 51

  Fly   189 LAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQR 253
                            |.|.:|..|:|...::.:|...:....|:||:    .:...|:.|    
Human    52 ----------------SGAREPPQAVSIKEAAGSSNLPAPERTMAGLS----KEPNTLRAP---- 92

  Fly   254 RKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMA 318
             :.|..||..||..||..|:..:|||..||:.||..:.|:..|:|.||||.|.|.|||.::..:.
Human    93 -RVRTAFTMEQVRTLEGVFQHHQYLSPLERKRLAREMQLSEVQIKTWFQNRRMKHKRQMQDPQLH 156

  Fly   319 EQ---NQHNQPA---------------------SSPRRVAVP-------------VLVKDGKPCS 346
            ..   :.|..||                     |.|:.:.:|             .|...|..|.
Human   157 SPFSGSLHAPPAFYSTSSGLANGLQLLCPWAPLSGPQALMLPPGSFWGLCQVAQEALASAGASCC 221

  Fly   347 GNNSSSQSQQHGTNSTSAGNNTG 369
            |...:|.....|..|.....:||
Human   222 GQPLASHPPTPGRPSLGPALSTG 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 24/55 (44%)
VENTXNP_055283.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 27/130 (21%)
Homeodomain 93..148 CDD:459649 24/54 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..248 5/18 (28%)

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