Protein Alignment scro and gbx2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_694496.1
• Gene: gbx2 / 245948
• ZFINID: ZDB-GENE-020509-2
• Length: 342
• Species: Danio rerio
• Alignment Length: 306
• Identity: 77/306 - (25%)
• Similarity: 116/306 - (37%)
• Gaps: 96/306 - (31%)

  Fly    79 AAAAVAHHHHNL--------SSIHHLQNLHSQHQSTL---FNSNHSTPFSVTDILSPIEESYRKL 132
            :|....|.||.:        ||:.....|.|...:||   |:|:.|...         :::.|||
Zfish    69 SALPTTHPHHPIPGLPSSFCSSLAQGMALTSTLMATLPGGFSSSPSQQH---------QDAARKL 124

  Fly   133 ---------------ELNGNPPSPFRSNSSSS--SINSPGTLTTSTMANPYAMGTLYHSPGVQTY 180
                           .|:|.....|.:..|:|  |.:...::.|||
Zfish   125 GSQSIHAMFDKSQDIRLDGEDGKTFATKDSTSIPSFHDSQSVHTST------------------- 170

  Fly   181 CGPTDNLSLAGHYTD-------MRNSASW-------YGSTANDPRFAISRLMSSSASGTMS---H 228
                    :.||..|       .|...|:       |.|..|.|..|:.:......||.:.   |
Zfish   171 --------VRGHSKDDSKEDDCHRKDESFSMDSDLDYSSDDNGPGNAMCQKEDGDGSGGLDDGVH 227

  Fly   229 MGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLT 293
            .||.:|....:           .:.|:||..||..|:.|||:.|..::|||..||..:|..:.|:
Zfish   228 GGNGAGNTTST-----------GKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLS 281

  Fly   294 PTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLV 339
            ..||||||||.|.|.||   .||....::..:|:.:| ::.||:.|
Zfish   282 EVQVKIWFQNRRAKWKR---VKAGNVNSKTGEPSRNP-KIVVPIPV 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	27/55 (49%)
gbx2	NP_694496.1	Homeodomain	242..298	CDD:459649	27/55 (49%)