Protein Alignment scro and ceh-30

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_508524.2
• Gene: ceh-30 / 191620
• WormBaseID: WBGene00000451
• Length: 237
• Species: Caenorhabditis elegans
• Alignment Length: 287
• Identity: 72/287 - (25%)
• Similarity: 98/287 - (34%)
• Gaps: 125/287 - (43%)

  Fly   113 STPFSVTDIL--SPIEESYRKLELNGNPPSP--FRSN-SSSSSINSPGTLTTSTMANPYAMGTLY 172
            |:.|.::|||  ||...|:.    |.:.|||  .:|: |:|...:|||             |...
 Worm    39 SSSFRISDILEQSPNNSSHS----NDHDPSPQSIKSDFSTSPRASSPG-------------GDRM 86

  Fly   173 HSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAA 237
            .|||                                                            :
 Worm    87 GSPG------------------------------------------------------------S 91

  Fly   238 CSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQ 302
            |..|            ||.|.:||..|:.|||..|::|:|||..:|..||..:.||.||||.|:|
 Worm    92 CKKS------------RKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQ 144

  Fly   303 NHRYKCKRQAKE---------KAMAEQN-------QHNQPASSPRRVAVPVL----------VKD 341
            |.|.|.||||..         ...|.||       ..|...:.|....:|::          ...
 Worm   145 NRRTKWKRQATSGMDLLSEPGNLSAVQNLIRSSPYWANYITALPMGTQLPMMGLPMSMIVPPAHA 209

  Fly   342 GKPCSGNNS-----SSQSQQHGTNSTS 363
            .:|.|.:||     ||:|.|...:|.|
 Worm   210 FQPSSSSNSPSTHISSESPQLDVSSNS 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
ceh-30	NP_508524.2	Homeodomain	96..152	CDD:459649	28/55 (51%)