Protein Alignment scro and ceh-28

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_510169.4
• Gene: ceh-28 / 191619
• WormBaseID: WBGene00000450
• Length: 201
• Species: Caenorhabditis elegans
• Alignment Length: 219
• Identity: 74/219 - (33%)
• Similarity: 101/219 - (46%)
• Gaps: 57/219 - (26%)

  Fly   104 QSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSIN--SPGTLTTSTMANPY 166
            |||..:|  :|....::::.|.::|        ..||.|: |:..|.:|  .....:.|.:.|||
 Worm     2 QSTQISS--TTVILPSEVIQPPQQS--------AVPSEFK-NTLPSRLNLFEGFDQSFSELTNPY 55

  Fly   167 AMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGN 231
                       |.........||.|       ::|:|.|.:.:.|         |......|
 Worm    56 -----------QPVIPLMQRESLLG-------ASSYYSSPSQNQR---------SYQNHRQH--- 90

  Fly   232 MSGLAACSVSDSKPLQFPL---AQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLT 293
                       |.|....|   .|:||.||||||.||.|||.|||:|||::|.|||.||..:.||
 Worm    91 -----------SNPDTINLRSQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLT 144

  Fly   294 PTQVKIWFQNHRYKCKRQAKEKAM 317
            .|||||||||.||||||.|:::.:
 Worm   145 ATQVKIWFQNRRYKCKRLAQDRTL 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	40/55 (73%)
ceh-28	NP_510169.4	Homeodomain	105..161	CDD:459649	40/55 (73%)