Protein Alignment scro and ceh-1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_508796.2
• Gene: ceh-1 / 191614
• WormBaseID: WBGene00000428
• Length: 171
• Species: Caenorhabditis elegans
• Alignment Length: 127
• Identity: 44/127 - (34%)
• Similarity: 57/127 - (44%)
• Gaps: 8/127 - (6%)

  Fly   212 FAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQR 276
            |.:..|:|.....:.|.........|.....|:.|:.     |:.|..||..|:..||.:||..|
 Worm     4 FRVEDLLSEREKDSNSDEATHQKSPADGGKSSRKLKM-----RRARTAFTYEQLVALENKFKTSR 63

  Fly   277 YLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVL 338
            |||..||.:||..:.|:.|||||||||.|.|.|   |.....:.|....|.||......|:|
 Worm    64 YLSVVERLNLAIQLQLSETQVKIWFQNRRTKWK---KHNPGQDANTPQTPPSSDETQIQPIL 122

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	29/55 (53%)
ceh-1	NP_508796.2	COG5576	2..118	CDD:227863	42/121 (35%)
		Homeodomain	41..97	CDD:459649	30/58 (52%)