Protein Alignment scro and pha-2

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_508131.4
• Gene: pha-2 / 187454
• WormBaseID: WBGene00004011
• Length: 214
• Species: Caenorhabditis elegans
• Alignment Length: 205
• Identity: 57/205 - (27%)
• Similarity: 86/205 - (41%)
• Gaps: 30/205 - (14%)

  Fly   116 FSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAM---GTLYHSPGV 177
            |.::.:|.....|..|.|.:...|.|   ..|..|:|.....|......|...   |||..:|.:
 Worm     5 FYISSLLQEDTPSKEKPETSSESPIP---TGSECSLNESSDTTLDQKMEPNKKMFNGTLDFNPWI 66

  Fly   178 QTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSHMGN--MSGLAACSV 240
               |..:.  .||...:  :|..:..|:....|      |::.:.:.||.:|.:  :|.|
 Worm    67 ---CHVSQ--QLAAQLS--QNGKNRPGAPNQVP------LLNMNVNQTMGNMWDPRLSWL----- 113

  Fly   241 SDSKPLQFPLAQRRK-RRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNH 304
               .|......|:|| .::.||..|...||.:|...:|||..||:.||..:.|:..|||.||||.
 Worm   114 ---YPYMSKSPQKRKGGQIRFTNEQTDALEHKFDSHKYLSPQERKKLAKSLSLSERQVKTWFQNR 175

  Fly   305 RYKCKRQAKE 314
            |.|.:|..|:
 Worm   176 RAKWRRVRKD 185

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	25/56 (45%)
pha-2	NP_508131.4	Homeodomain	130..181	CDD:459649	23/50 (46%)