Protein Alignment scro and nob-1

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_001369824.1
• Gene: nob-1 / 176641
• WormBaseID: WBGene00003779
• Length: 243
• Species: Caenorhabditis elegans
• Alignment Length: 212
• Identity: 53/212 - (25%)
• Similarity: 83/212 - (39%)
• Gaps: 48/212 - (22%)

  Fly   143 RSNSSSSSINSPGTLTTST-MANPYAMGTLYHSPGVQTYCGPTDN---LSLAGHYTDMRN----S 199
            ||...|.:.:||....:|| |..|...|.....|...    ||.|   :.:...|||...    |
 Worm    46 RSERESETGSSPQLAPSSTGMVMPGTAGMYGFGPSRM----PTANEFGMMMNPVYTDFYQNPLAS 106

  Fly   200 ASWYG------STANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLA------- 251
            ..||.      .|||   ::|..|           .||:|.:...:.:.|.....|.|
 Worm   107 TGWYSYGQPYQFTAN---YSIPSL-----------DGNLSDITIPTTAGSSAATTPNAAMHLPWA 157

  Fly   252 ---QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAK 313
               ..:|:|..:.:.|:..||..:...:||:...|..|::.:.|...|||:||||      |:.|
 Worm   158 ISHDGKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQN------RRMK 216

  Fly   314 EKAMAEQNQHNQPASSP 330
            :|.:.:::....|..:|
 Worm   217 DKKLRQRHSGPFPHGAP 233

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	17/55 (31%)
nob-1	NP_001369824.1	Homeodomain	163..219	CDD:459649	19/61 (31%)