Protein Alignment scro and php-3

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: NP_499573.1
• Gene: php-3 / 176640
• WormBaseID: WBGene00004024
• Length: 275
• Species: Caenorhabditis elegans
• Alignment Length: 275
• Identity: 76/275 - (27%)
• Similarity: 104/275 - (37%)
• Gaps: 90/275 - (32%)

  Fly   104 QSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAM 168
            |..:.|||...||..:   |...|::     :.:|.|||...|     :||.|.:::      |.
 Worm     6 QQMMNNSNMPPPFVKS---SDSHETH-----DESPTSPFIKRS-----DSPATTSSA------AA 51

  Fly   169 GTLYH----------------SPGVQ--TYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFA-- 213
            ..:.|                |.||.  :....::|||    .|...|.:.....||:.|:.|
 Worm    52 AAMQHNFWSTRAAQLQQSVSGSSGVSSGSSSSASNNLS----RTQADNHSERGSDTASSPQVAPL 112

  Fly   214 -ISRLMSSSASGT--------------MSHMGNMS--------GLAACSVSDSKPLQFPLAQ--- 252
             .|..||..|:..              .:.|.|.|        .|||.|...|.|.|:|.|.
 Worm   113 PTSSGMSMPAAAAAGMYPFNAGRFPTEFNMMVNQSMYNDFYSNSLAASSWPYSYPQQYPFANYSM 177

  Fly   253 ---------------------RRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQ 296
                                 .||:|..:|:||..|||:.|....|:|..:|..||..:|||..|
 Worm   178 PSLDGNLNDGGQLEWTSSSHAMRKKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQ 242

  Fly   297 VKIWFQNHRYKCKRQ 311
            |||||||.|.|.|:|
 Worm   243 VKIWFQNRRMKDKKQ 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	28/55 (51%)
php-3	NP_499573.1	Homeodomain	200..256	CDD:459649	28/55 (51%)