DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Hoxb7

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_034590.2 Gene:Hoxb7 / 15415 MGIID:96188 Length:217 Species:Mus musculus


Alignment Length:257 Identity:66/257 - (25%)
Similarity:98/257 - (38%) Gaps:66/257 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LSSIHHLQNLHSQHQST-------LFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSS 147
            :||:::...|.|::.:.       .|....|..|:    .:|....|     ...|.:|| |.|.
Mouse     1 MSSLYYANALFSKYPAASSVFAPGAFPEQTSCAFA----SNPQRPGY-----GAGPGAPF-SASV 55

  Fly   148 SSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTD-NLSLAGHYTDMRNSASWYGSTANDPR 211
            ....:..|.:...:.|..||.|..........:|.|.: |||               |....|| 
Mouse    56 QGLYSGGGAMAGQSAAGVYAAGYGLEPSSFNMHCAPFEQNLS---------------GVCPGDP- 104

  Fly   212 FAISRLMSSSASGTMSHMGNMSGLAACS-------VSDSKPLQFPLAQRRKRRVLFTQAQVYELE 269
                    :.|:|......  |.|||.|       :..|.|      .|::.|..:|:.|..|||
Mouse   105 --------AKAAGAKEQRD--SDLAAESNFRIYPWMRSSGP------DRKRGRQTYTRYQTLELE 153

  Fly   270 RRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAK---------EKAMAEQNQ 322
            :.|...|||:...|..:|..:.||..|:||||||.|.|.|::.|         :||.||:.:
Mouse   154 KEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTSGPGTTGQDKAEAEEEE 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 23/55 (42%)
Hoxb7NP_034590.2 Antp-type hexapeptide 126..131 0/4 (0%)
Homeodomain 138..194 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..217 6/24 (25%)

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