DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Hmx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_666110.1 Gene:Hmx2 / 15372 MGIID:107159 Length:273 Species:Mus musculus


Alignment Length:91 Identity:41/91 - (45%)
Similarity:57/91 - (62%) Gaps:3/91 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 AQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEK 315
            |.::|.|.:|:::|||:||..|..:||||:.||..|||.:.||.||||.||||.|.|.|||...:
Mouse   147 AAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSAE 211

  Fly   316 AMAEQNQHNQPASSPRRVAVPVLVKD 341
            ..|....|   ||:...|.:|::.:|
Mouse   212 LEAANMAH---ASAQTLVGMPLVFRD 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 30/55 (55%)
Hmx2NP_666110.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..154 2/6 (33%)
Homeodomain 150..206 CDD:459649 30/55 (55%)

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