DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Hhex

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_032271.1 Gene:Hhex / 15242 MGIID:96086 Length:271 Species:Mus musculus


Alignment Length:294 Identity:74/294 - (25%)
Similarity:115/294 - (39%) Gaps:72/294 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 LFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTL 171
            |....|.|||.:.||            |...|.:|    :.:.::.||.:..||.:::       
Mouse    24 LLQPAHPTPFYIDDI------------LGRGPAAP----TPTPTLPSPNSSFTSLVSS------- 65

  Fly   172 YHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSASGTMSH--MGNMSG 234
            |.:|..:    ||.......|:.....:|::..|....|.:...|.::......:.|  :|    
Mouse    66 YRTPVYE----PTPVHPAFSHHPAAALAAAYGPSGFGGPLYPFPRTVNDYTHALLRHDPLG---- 122

  Fly   235 LAACSVSDSKP------LQFPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLT 293
                     ||      ||.||.:|:..:|.|:..|..|||::|:.|:|||.|||:.||.::.|:
Mouse   123 ---------KPLLWSPFLQRPLHKRKGGQVRFSNDQTVELEKKFETQKYLSPPERKRLAKMLQLS 178

  Fly   294 PTQVKIWFQNHRYKCKRQAKEKAMA-------------EQNQ-----HNQPASSPRRVAVPVLVK 340
            ..|||.||||.|.|.:|..:|...:             ||.|     .|:.||..|....|    
Mouse   179 ERQVKTWFQNRRAKWRRLKQENPQSNKKDALDSLDTSCEQGQDLPSEQNKGASLDRSQCSP---- 239

  Fly   341 DGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNG 374
              .|.|..:..|:..:..........:.|..|.|
Mouse   240 --SPASQEDPDSEISEDSDQEVDIEGDKGYFNAG 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 26/55 (47%)
HhexNP_032271.1 Interaction with SOX13. /evidence=ECO:0000250|UniProtKB:Q03014 1..138 31/153 (20%)
Required for WNT signaling induction. /evidence=ECO:0000250|UniProtKB:Q03014 138..271 42/138 (30%)
Homeodomain 143..195 CDD:459649 26/51 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..271 15/81 (19%)

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