DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and NKX2-5

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_004378.1 Gene:NKX2-5 / 1482 HGNCID:2488 Length:324 Species:Homo sapiens


Alignment Length:337 Identity:111/337 - (32%)
Similarity:151/337 - (44%) Gaps:80/337 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 TPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQ 178
            |||||.|||: :|:..|.|...|...:...:..:.||     .:..:.....|| |....:||: 
Human    10 TPFSVKDILN-LEQQQRSLAAAGELSARLEATLAPSS-----CMLAAFKPEAYA-GPEAAAPGL- 66

  Fly   179 TYCGPTDNLSLAGHYTDMRNSASWYGST-------------ANDPRFAISRLMSSSASGTMSHMG 230
                |.....| |........||.:.:.             |.|||.....|.:           
Human    67 ----PELRAEL-GRAPSPAKCASAFPAAPAFYPRAYSDPDPAKDPRAEKKELCA----------- 115

  Fly   231 NMSGLAACSVSDSKPLQFPLAQRRKR-RVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTP 294
             :........:::...:.|.|:||:: ||||:||||||||||||||||||||||:.|||::.||.
Human   116 -LQKAVELEKTEADNAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTS 179

  Fly   295 TQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQSQQHGT 359
            |||||||||.|||||||.:::.:........|....||:||||||:|||||.| :|:..:..:|.
Human   180 TQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLG-DSAPYAPAYGV 243

  Fly   360 NSTSAGNN---------------------------------TGSANNGNANSGIVSVTANVSGGL 391
            .....|.|                                 |.:|||...|.|:..:.|..|.|:
Human   244 GLNPYGYNAYPAYPGYGGAACSPGYSCTAAYPAGPSPAQPATAAANNNFVNFGVGDLNAVQSPGI 308

  Fly   392 NLITGDAPNSHS 403
                   |.|:|
Human   309 -------PQSNS 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 45/56 (80%)
NKX2-5NP_004378.1 Homeodomain 145..195 CDD:459649 41/49 (84%)

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