DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and NKX2-6

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001129743.2 Gene:NKX2-6 / 137814 HGNCID:32940 Length:301 Species:Homo sapiens


Alignment Length:343 Identity:117/343 - (34%)
Similarity:144/343 - (41%) Gaps:100/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 STPFSVTDIL-------------------SPIEESYRKLELNGNPPSPFRSNSSS-------SSI 151
            ||||||.|||                   ||  |:::.|.::..|......|:..       ...
Human     8 STPFSVKDILRLERERSCPAASPHPRVRKSP--ENFQYLRMDAEPRGSEVHNAGGGGGDRKLDGS 70

  Fly   152 NSPG-------TLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWYGSTAND 209
            ..||       .:....|..|        .||:                    |:||..|.....
Human    71 EPPGGPCEAVLEMDAERMGEP--------QPGL--------------------NAASPLGGGTRV 107

  Fly   210 PRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQ 274
            |...:                   |.:..||...:..|....||||.||||:||||..|||||||
Human   108 PERGV-------------------GNSGDSVRGGRSEQPKARQRRKPRVLFSQAQVLALERRFKQ 153

  Fly   275 QRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLV 339
            ||||||||||||||.:.||.|||||||||.|||||||.::|:: |...|   ..:||||||||||
Human   154 QRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQRQDKSL-ELAGH---PLTPRRVAVPVLV 214

  Fly   340 KDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSP 404
            :|||||.|....:.:   ..:..||..:..|...|.:.       |....|.......||:..:|
Human   215 RDGKPCLGPGPGAPA---FPSPYSAAVSPYSCYGGYSG-------APYGAGYGTCYAGAPSGPAP 269

  Fly   405 DTSSSLLASYG-TVGGSN 421
            .|.   |||.| ..||.|
Human   270 HTP---LASAGFGHGGQN 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 46/55 (84%)
NKX2-6NP_001129743.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..135 24/161 (15%)
Homeodomain 133..189 CDD:459649 46/55 (84%)

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