DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Dlx4

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_031893.3 Gene:Dlx4 / 13394 MGIID:94904 Length:240 Species:Mus musculus


Alignment Length:241 Identity:67/241 - (27%)
Similarity:103/241 - (42%) Gaps:55/241 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 PSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMRNSASWY 203
            |.|.|   .:|::..|......::...|.:|.   |||  |...|  :||.:..|...|:.:...
Mouse     7 PLPDR---GASNVVFPDLAPALSVVAAYPLGL---SPG--TAASP--DLSYSQSYGHPRSYSHPG 61

  Fly   204 GSTANDPRFAISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFP---------LA-------- 251
            .:|..|                 |::.....|.|.|....:|.:.|         ||        
Mouse    62 PATPGD-----------------SYLPRQQQLVAPSQPFHRPAEHPQELEAESEKLALSLVPSQQ 109

  Fly   252 -----QRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ 311
                 :.||.|.:::..|:..|.:||:..:||:.|||..||:.:.||.|||||||||.|.|.|:.
Mouse   110 QSLTRKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKL 174

  Fly   312 AKEKA-MAEQNQHNQPAS-SPRRVAVPVL----VKDGKPCSGNNSS 351
            .|:.: ..|::...:|.| ||...|:|.:    ..|..|.||.::|
Mouse   175 LKQSSGEPEEDFSGRPPSLSPHSPALPFIWGLPKADTLPSSGYDNS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 27/55 (49%)
Dlx4NP_031893.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..70 7/42 (17%)
Homeodomain 117..173 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..194 4/18 (22%)

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