DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Dlx2

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_034184.1 Gene:Dlx2 / 13392 MGIID:94902 Length:332 Species:Mus musculus


Alignment Length:395 Identity:99/395 - (25%)
Similarity:154/395 - (38%) Gaps:124/395 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 HSTPFSVTDILSPIEESYRKLELNGNPPS--------PFRSNSSSSSINSP---GTLTTSTM--- 162
            |||..:.:       .:|.:   :..|||        ...|:||:||::.|   .||..||.   
Mouse    13 HSTQITAS-------STYHQ---HQQPPSGAGAGPGGNSNSSSSNSSLHKPQESPTLPVSTATDS 67

  Fly   163 ----------------ANPYA-MGTL-YHSPGVQTYCGPTDNLSLAGH------YTDMRNSASWY 203
                            |:||| ||:. ||:.|:       :|:|.:..      ||....|.:.|
Mouse    68 SYYTNQQHPAGGGGGGASPYAHMGSYQYHASGL-------NNVSYSAKSSYDLGYTAAYTSYAPY 125

  Fly   204 GSTA----NDPRFAISRLMSSSASGTMSHMGNMSGL-AACSVSDSKPLQFPLAQRRKRRVLFTQA 263
            |:::    |:|                    :...| ....:.:.||.:.     ||.|.:::..
Mouse   126 GTSSSPVNNEP--------------------DKEDLEPEIRIVNGKPKKV-----RKPRTIYSSF 165

  Fly   264 QVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPAS 328
            |:..|:|||::.:||:.|||..||:.:.||.|||||||||.|.|.|:..|...:..: ||...::
Mouse   166 QLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKFKKMWKSGEIPTE-QHPGASA 229

  Fly   329 SPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSGIVSVTANVSGGLNL 393
            ||...:.||            |:..|...|.....||...||...|..:||     ::.|...:.
Mouse   230 SPPCASPPV------------SAPASWDFGAPQRMAGGGPGSGGGGAGSSG-----SSPSSAASA 277

  Fly   394 ITGDAPNSHSPDTSSSLLASYGTVGGSNVAMLQQPCNNTLMSNSLAMAYRNQNNFISNGHQQQCG 458
            ..|:.|..|....|:|.|.:        .|.|..|       :....|:.:.:      |....|
Mouse   278 FLGNYPWYHQASGSASHLQA--------TAPLLHP-------SQTPQAHHHHH------HHHHAG 321

  Fly   459 GYLPL 463
            |..|:
Mouse   322 GGAPV 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 28/55 (51%)
Dlx2NP_034184.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..83 14/73 (19%)
DLL_N 54..135 CDD:463567 20/87 (23%)
Homeodomain 156..212 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..272 16/70 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..332 6/36 (17%)

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