DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Dlx1

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_034183.1 Gene:Dlx1 / 13390 MGIID:94901 Length:255 Species:Mus musculus


Alignment Length:295 Identity:76/295 - (25%)
Similarity:110/295 - (37%) Gaps:111/295 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSS 147
            ::|.|:::..:|              ::.||.|          :.:|                ||
Mouse    35 MSHGHYSMHCLH--------------SAGHSQP----------DGAY----------------SS 59

  Fly   148 SSSINSPGTLTTSTMANPYAMGTLYH--SP---GVQTYCGPTDNLSLAGHYTDMRNSASWYGSTA 207
            :||.:.|       :..||......|  ||   .||:|.|                |||...|..
Mouse    60 ASSFSRP-------LGYPYVNSVSSHASSPYISSVQSYPG----------------SASLAQSRL 101

  Fly   208 NDPRFAISRLMSSSASGTMSHMG----NMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYEL 268
            .||.       :.|...|:...|    |..|                .:.||.|.:::..|:..|
Mouse   102 EDPG-------ADSEKSTVVEGGEVRFNGKG----------------KKIRKPRTIYSSLQLQAL 143

  Fly   269 ERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKE-----KAMAEQNQHNQPAS 328
            .|||:|.:||:.|||..||:.:.||.|||||||||.|.|.|:..|:     :..|..|.....|.
Mouse   144 NRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMKQGGAALEGSALANGRALSAG 208

  Fly   329 SPRRVAVPVLVKDGKPCSGNNSSSQSQQHGTNSTS 363
            ||     ||      |...|.:||..:..|:::.|
Mouse   209 SP-----PV------PPGWNPNSSSGKGSGSSAGS 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 29/55 (53%)
Dlx1NP_034183.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..118 6/29 (21%)
Homeodomain 129..185 CDD:459649 29/55 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..233 11/40 (28%)

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