DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and LOC1281555

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061500014.1 Gene:LOC1281555 / 1281555 VectorBaseID:AGAMI1_001228 Length:423 Species:Anopheles gambiae


Alignment Length:295 Identity:74/295 - (25%)
Similarity:112/295 - (37%) Gaps:70/295 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNSSSSSINSPGTLTTSTMANPYAMGTLYH 173
            ||:.|:|...|. |||..|:     .|.:|.||..|.:..::  ||.|.....|......|.:..
Mosquito   154 NSSRSSPPPATR-LSPECEA-----RNAHPRSPHHSPAPCAA--SPATNKGPIMVPGIPAGLVRP 210

  Fly   174 SPGVQTYCGPT-DNLSLAGHYTDMRNSASWYGSTANDPRFAISRLMSSSA------SGTMSHMGN 231
            .|     ..|. |.|.....:....::|......|::.:|..::..::.|      .|...|..:
Mosquito   211 FP-----MAPNGDPLKPMPPFMGGNSAAELAVQAAHNQQFLAAQFQAALAHVHGQHGGFGGHPAH 270

  Fly   232 MSGLAACSVSDSKPL---------------QFP----LAQRRKRRV--LFTQAQVYELERRFKQQ 275
            :....|....:|.||               :||    |..|:.:||  .|:.:|:.:||..|:..
Mosquito   271 LHNHPANMPRESYPLYPWLLSRHGRNVFPPRFPGSYLLPFRKPKRVRTAFSPSQLLKLEHAFENN 335

  Fly   276 RYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVK 340
            .|:...||:.||..:.||.||||:||||.|.|.||..:|    |..:.|..:....|        
Mosquito   336 HYVVGAERKSLAQSLSLTETQVKVWFQNRRTKHKRMQQE----EDAKSNGGSGEGGR-------- 388

  Fly   341 DGKPCSGN-----------------NSSSQSQQHG 358
            ||:...|.                 .|....|:||
Mosquito   389 DGRHSPGYEEDDEDELIDMEMDDECGSDEDEQEHG 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 24/57 (42%)
LOC1281555XP_061500014.1 None

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