DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and Dr

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_313452.5 Gene:Dr / 1274345 VectorBaseID:AGAMI1_005699 Length:386 Species:Anopheles gambiae


Alignment Length:312 Identity:82/312 - (26%)
Similarity:129/312 - (41%) Gaps:74/312 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 SLSPKDTLI-----HTAISQHHQVDTSTKLNTNETST--------------QNTVSTAAAAAVAH 85
            ||:|...|:     |.|...|..:  :|.|.|..|:|              .::.:|::::..:.
Mosquito    69 SLTPLSPLMVHGPPHGAALLHQAM--TTALTTVTTTTLPGTSPSSDMLPANLSSHTTSSSSPRSQ 131

  Fly    86 HH----HNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPFRSNS 146
            |.    .||.:..|....||..:|..::|||.   ...|.:..||:..::|..:|:.|...:.: 
Mosquito   132 HDGSSLRNLDADRHTDTPHSLLESDDYDSNHD---EEEDSIVDIEDMDQELSESGSQPGGRKGS- 192

  Fly   147 SSSSINSPGTLTTSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAGHYTDMR---------NSASW 202
                 .|||        :|.|||..:.||       |...|:.|..:..:|         .:|:|
Mosquito   193 -----GSPG--------SPSAMGMGHGSP-------PGAALAAAAGHVPIRPTPFSALAAAAAAW 237

  Fly   203 YGSTANDPRFAISRLMSSSASGTMSHMGNMSGLAA---------CSVSDSKPLQFPLAQRRKRRV 258
            .|.:...|.....::......|.....|..:|...         |::...||       .||.|.
Mosquito   238 GGMSGGVPWPGARQMPPFGPPGLFPGQGFGAGQLGGDNEPPRIKCNLRKHKP-------NRKPRT 295

  Fly   259 LFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKR 310
            .||..|:..||::|::::|||..||...:|.:.||.|||||||||.|.|.||
Mosquito   296 PFTTQQLLSLEKKFREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKR 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 28/55 (51%)
DrXP_313452.5 None

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