Protein Alignment scro and LOC1272782

DIOPT Version :10

• Sequence 1: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Sequence 2: XP_311693.5
• Gene: LOC1272782 / 1272782
• VectorBaseID: AGAMI1_001207
• Length: 279
• Species: Anopheles gambiae
• Alignment Length: 330
• Identity: 81/330 - (24%)
• Similarity: 114/330 - (34%)
• Gaps: 104/330 - (31%)

  Fly   116 FSVTDILSPIEESYRKLELNGNPPSPFR----SNSSSSSINSPGTLTTSTMANPYAMGTLYHSP- 175
            ||:..||:...|.|.|.....|.....|    :||||||.||                    ||
Mosquito    17 FSIEHILTRAGERYSKRRKLSNEVGGCRNCCSTNSSSSSSNS--------------------SPR 61

  Fly   176 GVQTYCGPTDNLSLAGHYTDMRNSASWYGSTAN---DPRFAISRLMSSSASGTMSHMGNMSGLAA 237
            .|.:..|..|:....|...|..      |:.|:   |....:.:       ..|.|.|..:|...
Mosquito    62 SVHSEEGEGDDNDNGGRLRDEP------GTEADEELDEEIDVGQ-------SVMQHPGQEAGFLP 113

  Fly   238 CSVSDSKPL------------QFPLAQR---------RKRRVLFTQAQVYELERRFKQQRYLSAP 281
            .:.|...|.            :.|..|:         |..||.||.||:..||..:|...|||:.
Mosquito   114 TAPSCGMPTFDWLYYTRYHPPKLPRPQKTGPVKRTPGRLPRVPFTPAQLSALEDAYKVSTYLSSE 178

  Fly   282 EREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGKPCS 346
            |...||..:.||.|:|||||||.|.:.:|:.:|.::.                          ..
Mosquito   179 EANQLAYSLELTNTRVKIWFQNRRARDRREKREASLM--------------------------TG 217

  Fly   347 GNNSSSQSQQHGTNST-------SAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSP 404
            |..::..|:.|.|:.|       :.|:....:..|:..|...||.|:..|         ..|.||
Mosquito   218 GGAATFTSESHPTHCTLLPPLYATVGSAASGSRTGSHPSSPSSVEASAGG---------RQSRSP 273

  Fly   405 DTSSS 409
            .|..|
Mosquito   274 TTDRS 278

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	27/55 (49%)
LOC1272782	XP_311693.5	None