DRSC/TRiP Functional Genomics Resources

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Protein Alignment scro and slou

DIOPT Version :10

Sequence 1:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_061507570.1 Gene:slou / 1271755 VectorBaseID:AGAMI1_009597 Length:731 Species:Anopheles gambiae


Alignment Length:404 Identity:94/404 - (23%)
Similarity:135/404 - (33%) Gaps:107/404 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IERKSYRELQINRDQYFVTAPNEE---DLVMSLSPKDTLIHTAISQHH----QVDTSTKL--NTN 67
            |||.......||....|..|...:   |:...:..:|     ...|||    :.|||.:|  :.|
Mosquito   353 IERFKIARTAINSTAAFAAAAAAKELSDIGFRIQLQD-----GAGQHHGGYARSDTSEELIVDGN 412

  Fly    68 ETSTQNTVSTAAAAAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKL 132
            |.|:|:.:|.......                     .::.|...:.|.::.|  :..|.:.::|
Mosquito   413 EESSQDGISGCPVDLT---------------------RSMDNGGDTKPHAIRD--TDKEAASKRL 454

  Fly   133 EL---NGNPPSPFRSNSSSSSINSPG---TLTTSTMANPYAMGTLYHSPGVQ-----TYCGPTDN 186
            ..   |...|:.|......:|....|   |..:..:..|...||....|.:.     .|....:|
Mosquito   455 AFSVENILDPNKFNGKQHCASGGGGGGAVTPISGGIFGPKLNGTKLGGPALNGAAGGNYATNNNN 519

  Fly   187 LSLAGHYTDMRNSAS---------W--YGSTANDPRF------------------------AISR 216
            .::..:..:..|:.|         |  .|....|.:.                        .:..
Mosquito   520 CTVNNNNNNNNNNNSINHNNNAKFWSQSGGLERDDKLDDDHSDSRSVKDVNDIDQDDMGDDTMGS 584

  Fly   217 LMSSSASGTMSH---MGNMSGLAACSVSDSKPLQFPLAQRRKRRVLFTQAQVYELERRFKQQRYL 278
            .|...||.|.|.   ..|.||......:.|||        |:.|..||..|:..||.:||..|||
Mosquito   585 DMDDHASETDSKKDGSNNRSGDGKSQGNSSKP--------RRARTAFTYEQLVSLENKFKTTRYL 641

  Fly   279 SAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRRVAVPVLVKDGK 343
            |..||.:||..:.||.|||||||||.|.|.|:|             .|........||.....|.
Mosquito   642 SVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ-------------NPGMDVNSPTVPPPNSGGS 693

  Fly   344 PCSGNNSSSQSQQH 357
            ...|:.:||....|
Mosquito   694 FGPGSYASSLLYPH 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 30/55 (55%)
slouXP_061507570.1 None

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